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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911649.1_cds_XP_016461673.1_54971
CDS Infomation

[gene=LOC107784981] [db_xref=GeneID:107784981] [protein=D-xylose-proton symporter-like 3, chloroplastic] [protein_id=XP_016461673.1] [location=join(12065..12259,12374..12447,13215..13293,13399..13458,13552..13618,13705..13829,13965..14066,14151..14528,14650..14697,14784..14846,15011..15091,15213..15311,20004..20141,20216..20350)] [gbkey=CDS]
Sequence

ATGGCTTCCACTTGTCTTCAACCTTTGTACTATCCTACAATAATACACTCAAAATCTCCA
TTGCTTAGTCTATCGAAGAAGCAAATTTTCACTGCTAGGAGCCTAAATCAATGTACAAGA
AGAAATTGCTCATTCATGGCAAGGAACAATGAAAGAAAACTGCCATTACTGCCTATTGGT
AGGCTCAGACTGAAGGTTTCGGCATCTTCAGGAGAAGAAGCTGAGTCGGCTTATCTAGAG
GAATTCAGTTGGTCTTCTGTCATTTTGCCATTTCTCTTTCCCGCCCTAGGCGGTTTATTA
TTTGGCTATGATATAGGTGCAACCTCAGGTGCTACCATCTCATTGCAGTCAGCTGAGCTT
AGTGGAACGACTTGGTACAACTTCTCTGCTGTTCAGCTTGGTCTTGTGGTCAGTGGTTCC
CTTTATGGAGCTCTTATTGGCTCCATACTTGCCTACCCATTCGCTGATTTCTTAGGGAGG
AGGAGGGAACTGATCATAGCAGCCCTTTTATATGCGGTTGGTGGTTCACTAACTGCCTAT
GCTCCAGGACTAGGGGCACTTTTGTTGGGCCGGCTTGTTTATGGGCTTGGAATTGGTTTG
GCAATGCATGGAGCACCTCTATATATAGCAGAGACTTGTCCGTCCCAAATCAGAGGAACA
TTAATCTCTTTAAAGGAGCTGGCAATAGTACTGGGTATTTTGCTGGGTTATTTTGTAGGT
AGCTATGAAATTAATGTCGTAGGAGGGTGGCGTTACATGTTTGGATTAAGTGCTCCAATT
GCTTTACTTATGGGGTTGGGCATGTGGAGTCTCCCTCCCTCTCCCAGATGGTTACTTCTG
AGGGCAATTCAAAGTAAAGGGCCACTGCAGGAATACAAAGAGAAGGCTATTGGTGCATTG
AGCAAACTAAGAGGCCGCCCTGCTGGTGACAAAGTATCTGAAAAGCAAATAGAAGATACA
ATTATCTCATTGAAAACTGCCTACTCAGATGAAGAAGCTGAAGGAAATTTTCTGGAGGTA
TTTCAGGGGCCAAGCTTGAAAGCATTTATAATTGGCGGAGGTTTGGTCCTTTTTCAACAG
ATAACTGGGCAGCCAAGCGTTCTATATTATGCTGGTTCAATTCTTCAGAGTGCTGGTTTT
TCTGCGGCTGCGGATGCTGCTCGAGTTTCAGTCGTTATTGGTGTATTTAAGTCACTAATG
ACGGCAGTCGCTGTCCTAAAAGCTGATGACCTTGGGAGAAGGCCATTGTTAATTGGAGGA
GTCAGTGGAATTGCCCTATCGCTGTTTCTTCTTTCAGCTTATTATAAATTTCTTGGGAGT
TTTCCTTTTGTTGCTGTTGCTGCTCTGCTTCTCTATGTGGGATGCTACCAGATATCTTTT
GGGCCTATTAGCTGGCTTATGGTATCAGAAATATTCCCACTCCGCACCAGAGGGAAGGGT
ATAAGTCTAGCTGTTCTCACGAATTTTGGTTCTAATGCAATCGTAACCTTTGCTTTCTCA
CCTCTGAAGGAGTTTCTTGGGGCAGAAAATCTTTTCCTTCTGTTTGGAGCAATTGCTTTG
TTGTCACTTCTGTTTGTGATCACCTCGGTTCCAGAGACTAAAGGCTTGAGCTTGGAAGAA
ATTGAGTCCAAAATCTTGAAATGA

Peptide Sequence

PEP ID

XP_016461673.1
PEP Infomation

PREDICTED: D-xylose-proton symporter-like 3, chloroplastic [Nicotiana tabacum]
Sequence

MASTCLQPLYYPTIIHSKSPLLSLSKKQIFTARSLNQCTRRNCSFMARNNERKLPLLPIG
RLRLKVSASSGEEAESAYLEEFSWSSVILPFLFPALGGLLFGYDIGATSGATISLQSAEL
SGTTWYNFSAVQLGLVVSGSLYGALIGSILAYPFADFLGRRRELIIAALLYAVGGSLTAY
APGLGALLLGRLVYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELAIVLGILLGYFVG
SYEINVVGGWRYMFGLSAPIALLMGLGMWSLPPSPRWLLLRAIQSKGPLQEYKEKAIGAL
SKLRGRPAGDKVSEKQIEDTIISLKTAYSDEEAEGNFLEVFQGPSLKAFIIGGGLVLFQQ
ITGQPSVLYYAGSILQSAGFSAAADAARVSVVIGVFKSLMTAVAVLKADDLGRRPLLIGG
VSGIALSLFLLSAYYKFLGSFPFVAVAALLLYVGCYQISFGPISWLMVSEIFPLRTRGKG
ISLAVLTNFGSNAIVTFAFSPLKEFLGAENLFLLFGAIALLSLLFVITSVPETKGLSLEE
IESKILK

Transcript Sequence

Gene sequence data has not been registered.